CDS

Accession Number TCMCG023C20349
gbkey CDS
Protein Id PIN06882.1
Location join(8586..8654,9337..9600,9680..9766,9978..10324,10421..10610,10716..10891,11734..11803,11887..12076,12456..12551,12635..12729,12836..12955,13854..14060)
Organism Handroanthus impetiginosus
locus_tag CDL12_20558

Protein

Length 636aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA324125, BioSample:SAMN05195323
db_source NKXS01004292.1
Definition DNA repair protein, SNF2 family [Handroanthus impetiginosus]
Locus_tag CDL12_20558

EGGNOG-MAPPER Annotation

COG_category K
Description ATP-dependent DNA helicase DDM1-like isoform X1
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K19001        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000785        [VIEW IN EMBL-EBI]
GO:0000786        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006342        [VIEW IN EMBL-EBI]
GO:0006344        [VIEW IN EMBL-EBI]
GO:0006346        [VIEW IN EMBL-EBI]
GO:0006349        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009292        [VIEW IN EMBL-EBI]
GO:0009294        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031056        [VIEW IN EMBL-EBI]
GO:0031057        [VIEW IN EMBL-EBI]
GO:0031058        [VIEW IN EMBL-EBI]
GO:0031060        [VIEW IN EMBL-EBI]
GO:0031062        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031400        [VIEW IN EMBL-EBI]
GO:0031401        [VIEW IN EMBL-EBI]
GO:0032196        [VIEW IN EMBL-EBI]
GO:0032197        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0032993        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035065        [VIEW IN EMBL-EBI]
GO:0035067        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044030        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044764        [VIEW IN EMBL-EBI]
GO:0044815        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051570        [VIEW IN EMBL-EBI]
GO:0051574        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071514        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090239        [VIEW IN EMBL-EBI]
GO:0090241        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901983        [VIEW IN EMBL-EBI]
GO:1901984        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1905268        [VIEW IN EMBL-EBI]
GO:1905269        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000756        [VIEW IN EMBL-EBI]
GO:2000757        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]
GO:2001251        [VIEW IN EMBL-EBI]
GO:2001252        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGGCCGAGAACGAAGTAAAGAGCGAACCACTAGTAGATTCTCCGACCTCTGTTCTTGAAGACGAGGACTGCAAGGAGAACCTTGGCGTTAAACTGGAGGACAAAATAGATGCAGAAAGCAGAGATTGTTCTCTTATTTCAAAAACCATGGAAGAGGAGGAAGAAAAGTTGCAGGAAGAGCGGTTGAAAGAAGAAGAGGAGGAAAAGGAAATTGAGCCTAAAGAAGAACCTCACTTGAATGACATCCAGTTTACTAAACTGGATGAGCTTTTAACACAGACCCAACTTTACTCTGAGTTTCTGCTGGAAAAAATGGATGATATAACAAAGAATGGGTTGGATGATGATGGGAAAGCTGTTAAAGAAGGAAAGCGAGGGCGTGGTTCCAAAAGGAAGTCTGGCGCAAGTTATAATAATAGGAAAGCCAAGAGAGCTGTTGAAGCCATGCTTACAAGAACTAAAGATGGTGCTTCTGCTGAAGATTCAACCCTTACAGATGAAGAGAGAGCTGAGAAAGAGCAGGCAGAATTGGTACCCTTGTTGACCGGTGGAAAGCTGAAGTCTTATCAGATTAAAGGTGTAAAATGGATGATTTCATTGTGGCAAAATGGACTAAATGGGATCCTTGCTGATCAAATGGGGCTTGGCAAAACAATTCAAACTATTGCTTTTCTTGCACACCTCAAAGGAAATGGATTGCATGGCCCCTACTTGATTATTGCTCCACTCTCCACTCTCTCGAATTGGATGAGTGAAATAAAGAGGTTCGTGCCCTCAGTGGATGCAATCATTTACCATGGTTCTAAGAAAGATAGGGATGAAATTATTAGAAAGCACATGCCTAAGGCAGTAGGGCCCAGATTCCCTATTGTCATTACTTCTTATGAGATTGCACTAAGTGATGCAAGAAAACGGTTGAGACATTACAGCTGGAAATACCTGGTTGTTGATGAGGGACACAGGTTGAAGAACTCGAAGTGTAAATTGGTGAAAGAACTGAGGCACTTATCTGTTGAGAACAAGCTTCTCTTGACTGGCACGCCTCTGCAAAACAACTTAGCCGAGCTCTGGTCACTGTTGAATTTCATTCTTCCTGATATTTTTTCATCCCACGAAGAGTTTGAGTCATGGTTTGACTTTTCAGGGAAGTACACTAACGAAGCTGTCAAAGAAGAAATTGAAGAGAAAAGAAGGGCTCAGGTGGTGGCCAAACTCCATGCTATATTGCGTCCATTTCTCCTGCGCAGAATGAAAGCAGATGTTGAACAAATGCTCCCTCGGAAGAAAGAAATTATCTTGTATGCCACAATGACTCCACATCAGAAGAATTTCCAGGATCATCTCATTAATCATACACTGGAGGGTCACCTGAGAGAGAAAACTAATTTTGCTTATGGCATGAAAGGAAAGCTCAATAATTTGATGATTCAACTTCGGAAGAACTGCAACCACCCTGACCTTTTGGAGTCTGTATTTGATGGTTCCCATCTCTATCCACCTGTCGAGCAGATGATTGAACAGTGTGGCAAATTTCGATTATTGGACAGATTATTGCCTAAGCTGTTTGCTCGCCAGCACAAAGTTTTGATATTTTCTCAATGGACCAAGATCTTGGACATAATGGATTACTACTTAACTGAAAAGGGATTTAACGTCTGCAGAATCGATGGCAACGTTAAATTGGAAAAACGACAAAAGCAGATTGAAGAATTCAATGATGTGGACAGTAAATATAGAGTCTTTCTCCTTAGCACCCGAGCTGGTGGGCTGGGTATAAATCTTACTGCGGCTGACACCTGCATTTTATATGACAGTGATTGGGTAGCTTCTTTAACTTGTGGTCCTCTCTCTCTCTCTCTCACTCACACACACACACAGATGCACACAAAACGAATGTGTTTGCCTTGA
Protein:  
MMAENEVKSEPLVDSPTSVLEDEDCKENLGVKLEDKIDAESRDCSLISKTMEEEEEKLQEERLKEEEEEKEIEPKEEPHLNDIQFTKLDELLTQTQLYSEFLLEKMDDITKNGLDDDGKAVKEGKRGRGSKRKSGASYNNRKAKRAVEAMLTRTKDGASAEDSTLTDEERAEKEQAELVPLLTGGKLKSYQIKGVKWMISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLIIAPLSTLSNWMSEIKRFVPSVDAIIYHGSKKDRDEIIRKHMPKAVGPRFPIVITSYEIALSDARKRLRHYSWKYLVVDEGHRLKNSKCKLVKELRHLSVENKLLLTGTPLQNNLAELWSLLNFILPDIFSSHEEFESWFDFSGKYTNEAVKEEIEEKRRAQVVAKLHAILRPFLLRRMKADVEQMLPRKKEIILYATMTPHQKNFQDHLINHTLEGHLREKTNFAYGMKGKLNNLMIQLRKNCNHPDLLESVFDGSHLYPPVEQMIEQCGKFRLLDRLLPKLFARQHKVLIFSQWTKILDIMDYYLTEKGFNVCRIDGNVKLEKRQKQIEEFNDVDSKYRVFLLSTRAGGLGINLTAADTCILYDSDWVASLTCGPLSLSLTHTHTQMHTKRMCLP